Index

A | C | D | E | F | G | H | I | K | L | M | N | O | P | R | S | T | U | V

A

as_npy_array() (hplattice.Chain.Chain.Coords method)
(hplattice.Chain.Chain.Vectors method)
attemptswap() (in module hplattice.Replica)

C

Chain (class in hplattice.Chain)
Chain.Coords (class in hplattice.Chain)
Chain.Vectors (class in hplattice.Chain)
compute_mc_acceptance() (hplattice.Replica.Replica method)
Config (class in hplattice.Config)
contactstate() (hplattice.Chain.Chain method)
(hplattice.Replica.Replica method)
copy() (hplattice.Chain.Chain.Coords method)
(hplattice.Chain.Chain.Vectors method)

D

D() (hplattice.Monty.DistRestraint method)
distance_between_pts() (hplattice.Chain.Chain.Coords method)
DistRestraint (class in hplattice.Monty)
do_crankshaft() (hplattice.Chain.Chain method)
do_mc_sampling() (hplattice.MCSampler.MCSampler method)
do_rigid_rot() (hplattice.Chain.Chain method)
do_three_bead_flip() (hplattice.Chain.Chain method)

E

energy() (hplattice.Chain.Chain method)
(hplattice.Monty.DistRestraint method)
(hplattice.Replica.Replica method)
enumerate_states() (hplattice.Enumerator.Enumerator method)
Enumerator (class in hplattice.Enumerator)

F

finalize() (hplattice.Trajectory.Trajectory method)

G

get() (hplattice.Chain.Chain.Coords method)
(hplattice.Chain.Chain.Vectors method)
get_coord_array() (hplattice.Chain.Chain method)
get_hp_string() (hplattice.Chain.Chain method)
get_T() (hplattice.Replica.Replica method)
get_vec() (hplattice.Replica.Replica method)
get_vec_length() (hplattice.Chain.Chain method)
grow() (hplattice.Chain.Chain method)
(hplattice.Chain.Chain.Coords method)
(hplattice.Chain.Chain.Vectors method)

H

hplattice (module)
hplattice.Chain (module)
hplattice.Config (module)
hplattice.Enumerator (module)
hplattice.MCSampler (module)
hplattice.Monty (module)
hplattice.Replica (module)
hplattice.Trajectory (module)
hpstr2bin() (hplattice.Chain.Chain method)

I

increment() (hplattice.Chain.Chain.Vectors method)
init_mc_stats() (hplattice.Replica.Replica method)
is_first_vec_one() (hplattice.Chain.Chain method)
is_native() (hplattice.Replica.Replica method)
is_viable() (hplattice.Chain.Chain method)
(hplattice.Chain.Chain.Coords method)

K

kT() (hplattice.Monty.Monty method)
(hplattice.Replica.Replica method)

L

LatticeFactory (class in hplattice)

M

make_chain() (hplattice.LatticeFactory method)
make_configuration() (hplattice.LatticeFactory method)
make_monty() (hplattice.LatticeFactory method)
make_replica() (hplattice.LatticeFactory method)
make_trajectory() (hplattice.LatticeFactory method)
MCSampler (class in hplattice.MCSampler)
metropolis() (hplattice.Monty.Monty method)
metropolis_accept_move() (hplattice.Replica.Replica method)
Monty (class in hplattice.Monty)
move1() (hplattice.Monty.Monty method)
move2() (hplattice.Monty.Monty method)
move3() (hplattice.Monty.Monty method)

N

nextviable() (hplattice.Chain.Chain method)
nonsym() (hplattice.Chain.Chain method)

O

open_file_stream() (in module hplattice.Trajectory)

P

pop() (hplattice.Chain.Chain.Coords method)
(hplattice.Chain.Chain.Vectors method)
print_config() (hplattice.Config.Config method)
propose_move() (hplattice.Replica.Replica method)

R

random() (in module hplattice.Monty)
(in module hplattice.Replica)
read_configfile() (hplattice.Config.Config method)
record_stats() (hplattice.Replica.Replica method)
Replica (class in hplattice.Replica)
rotate_down_to_left() (hplattice.Chain.Chain.Coords method)
rotate_right_to_down() (hplattice.Chain.Chain.Coords method)
rotate_up_to_right() (hplattice.Chain.Chain.Coords method)

S

set() (hplattice.Chain.Chain.Coords method)
(hplattice.Chain.Chain.Vectors method)
set_idx() (hplattice.Chain.Chain.Vectors method)
shift() (hplattice.Chain.Chain method)
snapshot() (hplattice.Trajectory.Trajectory method)

T

Trajectory (class in hplattice.Trajectory)

U

update_chain() (hplattice.Chain.Chain method)

V

vec2coords() (hplattice.Chain.Chain method)
(hplattice.Chain.Chain.Coords method)